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Index
P
P
pv.BaseGeom() (class)
pv.BaseGeom.colorBy() (pv.BaseGeom method)
pv.BaseGeom.eachCentralAtom() (pv.BaseGeom method)
pv.BaseGeom.getColorForAtom() (pv.BaseGeom method)
pv.BaseGeom.selection() (pv.BaseGeom method)
pv.BaseGeom.setOpacity() (pv.BaseGeom method)
pv.BaseGeom.setSelection() (pv.BaseGeom method)
pv.BaseGeom.setShowRelated() (pv.BaseGeom method)
pv.BaseGeom.showRelated() (pv.BaseGeom method)
pv.color.byAtomProp() (pv.color method)
pv.color.byChain() (pv.color method)
pv.color.byElement() (pv.color method)
pv.color.byResidueProp() (pv.color method)
pv.color.bySS() (pv.color method)
pv.color.rainbow() (pv.color method)
pv.color.setColorPalette() (pv.color method)
pv.color.ssSuccession() (pv.color method)
pv.color.uniform() (pv.color method)
pv.CustomMesh() (class)
pv.CustomMesh.addSphere() (pv.CustomMesh method)
pv.CustomMesh.addTube() (pv.CustomMesh method)
pv.io.fetchPdb() (pv.io method)
pv.io.fetchSdf() (pv.io method)
pv.io.pdb() (pv.io method)
pv.io.sdf() (pv.io method)
pv.mol.Atom() (class)
pv.mol.Atom.bonds() (pv.mol.Atom method)
pv.mol.Atom.element() (pv.mol.Atom method)
pv.mol.Atom.isHetatm() (pv.mol.Atom method)
pv.mol.Atom.name() (pv.mol.Atom method)
pv.mol.Atom.occupancy() (pv.mol.Atom method)
pv.mol.Atom.pos() (pv.mol.Atom method)
pv.mol.Atom.tempFactor() (pv.mol.Atom method)
pv.mol.AtomView() (class)
pv.mol.AtomView.bonds() (pv.mol.AtomView method)
pv.mol.AtomView.element() (pv.mol.AtomView method)
pv.mol.AtomView.isHetatm() (pv.mol.AtomView method)
pv.mol.AtomView.name() (pv.mol.AtomView method)
pv.mol.AtomView.occupancy() (pv.mol.AtomView method)
pv.mol.AtomView.pos() (pv.mol.AtomView method)
pv.mol.AtomView.tempFactor() (pv.mol.AtomView method)
pv.mol.Bond() (class)
pv.mol.Chain() (class)
pv.mol.Chain.addResidue() (pv.mol.Chain method)
pv.mol.Chain.backboneTraces() (pv.mol.Chain method)
pv.mol.Chain.eachBackboneTrace() (pv.mol.Chain method)
pv.mol.Chain.name() (pv.mol.Chain method)
pv.mol.Chain.residueByRnum() (pv.mol.Chain method)
pv.mol.Chain.residues() (pv.mol.Chain method)
pv.mol.Chain.residuesInRnumRange() (pv.mol.Chain method)
pv.mol.ChainView() (class)
pv.mol.ChainView.addResidue() (pv.mol.ChainView method)
pv.mol.ChainView.backboneTraces() (pv.mol.ChainView method)
pv.mol.ChainView.eachBackboneTrace() (pv.mol.ChainView method)
pv.mol.ChainView.name() (pv.mol.ChainView method)
pv.mol.ChainView.residueByRnum() (pv.mol.ChainView method)
pv.mol.ChainView.residues() (pv.mol.ChainView method)
pv.mol.ChainView.residuesInRnumRange() (pv.mol.ChainView method)
pv.mol.matchResiduesByIndex() (pv.mol method)
pv.mol.matchResiduesByNum() (pv.mol method)
pv.mol.Mol() (class)
pv.mol.Mol.addChain() (pv.mol.Mol method)
pv.mol.Mol.addResidues() (pv.mol.Mol method)
pv.mol.Mol.atomCount() (pv.mol.Mol method)
pv.mol.Mol.atomSelect() (pv.mol.Mol method)
pv.mol.Mol.center() (pv.mol.Mol method)
pv.mol.Mol.chain() (pv.mol.Mol method)
pv.mol.Mol.chainByName() (pv.mol.Mol method)
pv.mol.Mol.chains() (pv.mol.Mol method)
pv.mol.Mol.chainsByName() (pv.mol.Mol method)
pv.mol.Mol.eachAtom() (pv.mol.Mol method)
pv.mol.Mol.eachResidue() (pv.mol.Mol method)
pv.mol.Mol.full() (pv.mol.Mol method)
pv.mol.Mol.residueSelect() (pv.mol.Mol method)
pv.mol.Mol.select() (pv.mol.Mol method)
pv.mol.Mol.selectWithin() (pv.mol.Mol method)
pv.mol.MolView() (class)
pv.mol.MolView.addAtom() (pv.mol.MolView method)
pv.mol.MolView.addChain() (pv.mol.MolView method)
pv.mol.MolView.atomCount() (pv.mol.MolView method)
pv.mol.MolView.atomSelect() (pv.mol.MolView method)
pv.mol.MolView.center() (pv.mol.MolView method)
pv.mol.MolView.chain() (pv.mol.MolView method)
pv.mol.MolView.chainByName() (pv.mol.MolView method)
pv.mol.MolView.chains() (pv.mol.MolView method)
pv.mol.MolView.chainsByName() (pv.mol.MolView method)
pv.mol.MolView.eachAtom() (pv.mol.MolView method)
pv.mol.MolView.eachResidue() (pv.mol.MolView method)
pv.mol.MolView.full() (pv.mol.MolView method)
pv.mol.MolView.removeAtom() (pv.mol.MolView method)
pv.mol.MolView.residueSelect() (pv.mol.MolView method)
pv.mol.MolView.select() (pv.mol.MolView method)
pv.mol.MolView.selectWithin() (pv.mol.MolView method)
pv.mol.Residue() (class)
pv.mol.Residue.addAtom() (pv.mol.Residue method)
pv.mol.Residue.atom() (pv.mol.Residue method)
pv.mol.Residue.atoms() (pv.mol.Residue method)
pv.mol.Residue.index() (pv.mol.Residue method)
pv.mol.Residue.isAminoAcid() (pv.mol.Residue method)
pv.mol.Residue.isWater() (pv.mol.Residue method)
pv.mol.Residue.name() (pv.mol.Residue method)
pv.mol.Residue.num() (pv.mol.Residue method)
pv.mol.ResidueView() (class)
pv.mol.ResidueView.addAtom() (pv.mol.ResidueView method)
pv.mol.ResidueView.atom() (pv.mol.ResidueView method)
pv.mol.ResidueView.atoms() (pv.mol.ResidueView method)
pv.mol.ResidueView.index() (pv.mol.ResidueView method)
pv.mol.ResidueView.isAminoAcid() (pv.mol.ResidueView method)
pv.mol.ResidueView.isWater() (pv.mol.ResidueView method)
pv.mol.ResidueView.name() (pv.mol.ResidueView method)
pv.mol.ResidueView.num() (pv.mol.ResidueView method)
pv.mol.superpose() (pv.mol method)
pv.Viewer() (class)
pv.Viewer.add() (pv.Viewer method)
pv.Viewer.addListener() (pv.Viewer method)
pv.Viewer.autoZoom() (pv.Viewer method)
pv.Viewer.ballsAndSticks() (pv.Viewer method)
pv.Viewer.cartoon() (pv.Viewer method)
pv.Viewer.centerOn() (pv.Viewer method)
pv.Viewer.clear() (pv.Viewer method)
pv.Viewer.customMesh() (pv.Viewer method)
pv.Viewer.fitTo() (pv.Viewer method)
pv.Viewer.get() (pv.Viewer method)
pv.Viewer.hide() (pv.Viewer method)
pv.Viewer.label() (pv.Viewer method)
pv.Viewer.lines() (pv.Viewer method)
pv.Viewer.lineTrace() (pv.Viewer method)
pv.Viewer.on() (pv.Viewer method)
pv.Viewer.points() (pv.Viewer method)
pv.Viewer.quality() (pv.Viewer method)
pv.Viewer.renderAs() (pv.Viewer method)
pv.Viewer.requestRedraw() (pv.Viewer method)
pv.Viewer.rm() (pv.Viewer method)
pv.Viewer.rotate() (pv.Viewer method)
pv.Viewer.setCamera() (pv.Viewer method)
pv.Viewer.setCenter() (pv.Viewer method)
pv.Viewer.setRotation() (pv.Viewer method)
pv.Viewer.setZoom() (pv.Viewer method)
pv.Viewer.show() (pv.Viewer method)
pv.Viewer.slabMode() (pv.Viewer method)
pv.Viewer.sline() (pv.Viewer method)
pv.Viewer.spheres() (pv.Viewer method)
pv.Viewer.spin() (pv.Viewer method)
pv.Viewer.trace() (pv.Viewer method)
pv.Viewer.translate() (pv.Viewer method)
pv.Viewer.tube() (pv.Viewer method)
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