PV
latest
Getting started with PV
The Viewer
Rendered Molecules
Drawing Geometric Shapes
Coloring Molecular Structures
Molecular Structures
Superposition of structures
PV Usage Code Samples
PV for developers documentation
PV
Docs
»
Index
Edit on GitHub
Index
P
P
pv.BaseGeom() (class)
pv.BaseGeom.colorBy() (pv.BaseGeom method)
pv.BaseGeom.eachCentralAtom() (pv.BaseGeom method)
pv.BaseGeom.getColorForAtom() (pv.BaseGeom method)
pv.BaseGeom.selection() (pv.BaseGeom method)
pv.BaseGeom.setOpacity() (pv.BaseGeom method)
pv.BaseGeom.setSelection() (pv.BaseGeom method)
pv.BaseGeom.setShowRelated() (pv.BaseGeom method)
pv.BaseGeom.showRelated() (pv.BaseGeom method)
pv.color.byAtomProp() (pv.color method)
pv.color.byChain() (pv.color method)
pv.color.byElement() (pv.color method)
pv.color.byResidueProp() (pv.color method)
pv.color.bySS() (pv.color method)
pv.color.rainbow() (pv.color method)
pv.color.setColorPalette() (pv.color method)
pv.color.ssSuccession() (pv.color method)
pv.color.uniform() (pv.color method)
pv.CustomMesh() (class)
pv.CustomMesh.addSphere() (pv.CustomMesh method)
pv.CustomMesh.addTube() (pv.CustomMesh method)
pv.io.fetchPdb() (pv.io method)
pv.io.fetchSdf() (pv.io method)
pv.io.pdb() (pv.io method)
pv.io.sdf() (pv.io method)
pv.mol.Atom() (class)
pv.mol.Atom.bonds() (pv.mol.Atom method)
pv.mol.Atom.element() (pv.mol.Atom method)
pv.mol.Atom.isHetatm() (pv.mol.Atom method)
pv.mol.Atom.name() (pv.mol.Atom method)
pv.mol.Atom.occupancy() (pv.mol.Atom method)
pv.mol.Atom.pos() (pv.mol.Atom method)
pv.mol.Atom.tempFactor() (pv.mol.Atom method)
pv.mol.AtomView() (class)
pv.mol.AtomView.bonds() (pv.mol.AtomView method)
pv.mol.AtomView.element() (pv.mol.AtomView method)
pv.mol.AtomView.isHetatm() (pv.mol.AtomView method)
pv.mol.AtomView.name() (pv.mol.AtomView method)
pv.mol.AtomView.occupancy() (pv.mol.AtomView method)
pv.mol.AtomView.pos() (pv.mol.AtomView method)
pv.mol.AtomView.tempFactor() (pv.mol.AtomView method)
pv.mol.Bond() (class)
pv.mol.Chain() (class)
pv.mol.Chain.addResidue() (pv.mol.Chain method)
pv.mol.Chain.backboneTraces() (pv.mol.Chain method)
pv.mol.Chain.eachBackboneTrace() (pv.mol.Chain method)
pv.mol.Chain.name() (pv.mol.Chain method)
pv.mol.Chain.residueByRnum() (pv.mol.Chain method)
pv.mol.Chain.residues() (pv.mol.Chain method)
pv.mol.Chain.residuesInRnumRange() (pv.mol.Chain method)
pv.mol.ChainView() (class)
pv.mol.ChainView.addResidue() (pv.mol.ChainView method)
pv.mol.ChainView.backboneTraces() (pv.mol.ChainView method)
pv.mol.ChainView.eachBackboneTrace() (pv.mol.ChainView method)
pv.mol.ChainView.name() (pv.mol.ChainView method)
pv.mol.ChainView.residueByRnum() (pv.mol.ChainView method)
pv.mol.ChainView.residues() (pv.mol.ChainView method)
pv.mol.ChainView.residuesInRnumRange() (pv.mol.ChainView method)
pv.mol.matchResiduesByIndex() (pv.mol method)
pv.mol.matchResiduesByNum() (pv.mol method)
pv.mol.Mol() (class)
pv.mol.Mol.addChain() (pv.mol.Mol method)
pv.mol.Mol.addResidues() (pv.mol.Mol method)
pv.mol.Mol.atomCount() (pv.mol.Mol method)
pv.mol.Mol.atomSelect() (pv.mol.Mol method)
pv.mol.Mol.center() (pv.mol.Mol method)
pv.mol.Mol.chain() (pv.mol.Mol method)
pv.mol.Mol.chainByName() (pv.mol.Mol method)
pv.mol.Mol.chains() (pv.mol.Mol method)
pv.mol.Mol.chainsByName() (pv.mol.Mol method)
pv.mol.Mol.eachAtom() (pv.mol.Mol method)
pv.mol.Mol.eachResidue() (pv.mol.Mol method)
pv.mol.Mol.full() (pv.mol.Mol method)
pv.mol.Mol.residueSelect() (pv.mol.Mol method)
pv.mol.Mol.select() (pv.mol.Mol method)
pv.mol.Mol.selectWithin() (pv.mol.Mol method)
pv.mol.MolView() (class)
pv.mol.MolView.addAtom() (pv.mol.MolView method)
pv.mol.MolView.addChain() (pv.mol.MolView method)
pv.mol.MolView.atomCount() (pv.mol.MolView method)
pv.mol.MolView.atomSelect() (pv.mol.MolView method)
pv.mol.MolView.center() (pv.mol.MolView method)
pv.mol.MolView.chain() (pv.mol.MolView method)
pv.mol.MolView.chainByName() (pv.mol.MolView method)
pv.mol.MolView.chains() (pv.mol.MolView method)
pv.mol.MolView.chainsByName() (pv.mol.MolView method)
pv.mol.MolView.eachAtom() (pv.mol.MolView method)
pv.mol.MolView.eachResidue() (pv.mol.MolView method)
pv.mol.MolView.full() (pv.mol.MolView method)
pv.mol.MolView.removeAtom() (pv.mol.MolView method)
pv.mol.MolView.residueSelect() (pv.mol.MolView method)
pv.mol.MolView.select() (pv.mol.MolView method)
pv.mol.MolView.selectWithin() (pv.mol.MolView method)
pv.mol.Residue() (class)
pv.mol.Residue.addAtom() (pv.mol.Residue method)
pv.mol.Residue.atom() (pv.mol.Residue method)
pv.mol.Residue.atoms() (pv.mol.Residue method)
pv.mol.Residue.index() (pv.mol.Residue method)
pv.mol.Residue.isAminoAcid() (pv.mol.Residue method)
pv.mol.Residue.isWater() (pv.mol.Residue method)
pv.mol.Residue.name() (pv.mol.Residue method)
pv.mol.Residue.num() (pv.mol.Residue method)
pv.mol.ResidueView() (class)
pv.mol.ResidueView.addAtom() (pv.mol.ResidueView method)
pv.mol.ResidueView.atom() (pv.mol.ResidueView method)
pv.mol.ResidueView.atoms() (pv.mol.ResidueView method)
pv.mol.ResidueView.index() (pv.mol.ResidueView method)
pv.mol.ResidueView.isAminoAcid() (pv.mol.ResidueView method)
pv.mol.ResidueView.isWater() (pv.mol.ResidueView method)
pv.mol.ResidueView.name() (pv.mol.ResidueView method)
pv.mol.ResidueView.num() (pv.mol.ResidueView method)
pv.mol.superpose() (pv.mol method)
pv.Viewer() (class)
pv.Viewer.add() (pv.Viewer method)
pv.Viewer.addListener() (pv.Viewer method)
pv.Viewer.autoZoom() (pv.Viewer method)
pv.Viewer.ballsAndSticks() (pv.Viewer method)
pv.Viewer.cartoon() (pv.Viewer method)
pv.Viewer.centerOn() (pv.Viewer method)
pv.Viewer.clear() (pv.Viewer method)
pv.Viewer.customMesh() (pv.Viewer method)
pv.Viewer.fitTo() (pv.Viewer method)
pv.Viewer.get() (pv.Viewer method)
pv.Viewer.hide() (pv.Viewer method)
pv.Viewer.label() (pv.Viewer method)
pv.Viewer.lines() (pv.Viewer method)
pv.Viewer.lineTrace() (pv.Viewer method)
pv.Viewer.on() (pv.Viewer method)
pv.Viewer.points() (pv.Viewer method)
pv.Viewer.quality() (pv.Viewer method)
pv.Viewer.renderAs() (pv.Viewer method)
pv.Viewer.requestRedraw() (pv.Viewer method)
pv.Viewer.rm() (pv.Viewer method)
pv.Viewer.rotate() (pv.Viewer method)
pv.Viewer.setCamera() (pv.Viewer method)
pv.Viewer.setCenter() (pv.Viewer method)
pv.Viewer.setRotation() (pv.Viewer method)
pv.Viewer.setZoom() (pv.Viewer method)
pv.Viewer.show() (pv.Viewer method)
pv.Viewer.slabMode() (pv.Viewer method)
pv.Viewer.sline() (pv.Viewer method)
pv.Viewer.spheres() (pv.Viewer method)
pv.Viewer.spin() (pv.Viewer method)
pv.Viewer.trace() (pv.Viewer method)
pv.Viewer.translate() (pv.Viewer method)
pv.Viewer.tube() (pv.Viewer method)